PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027172214.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 348aa MW: 39998.4 Da PI: 8.5394

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027172214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.5	1.1e-13	42	132	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE..TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled..esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k+ p+d+ +s l lp +f++ +++ + ++ l++ + r W v++ k + ++++GW++F +n L+ gD +vF+++g +ef XP_027172214.1 42 FMKAYFPPDSKQS--LKLPSSFTSFLKSS--LPDKVFLKNhyDDKRIWAVEV--AKIENDLFFQAGWSQFLAENCLEFGDLLVFQYNGGQEF--D 128 6677777777665..9****9666654..77899999954555***..******************************987777..6 PP EEEE CS B3 94 vkvf 97 +k++ XP_027172214.1 129 FKIL 132 6665 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MPLNKLFALV LKADKEVKEA ESCVLYDPGE EEMKAVRQYP AFMKAYFPPD SKQSLKLPSS 60 FTSFLKSSLP DKVFLKNHYD DKRIWAVEVA KIENDLFFQA GWSQFLAENC LEFGDLLVFQ 120 YNGGQEFDFK ILGKTADKRE VIYAFDFSSE EQQEEEYPQE MESENRSRRG AVGLKSKSNS 180 DSGRQEEFEE VSSKKKQKRD FRGSAARKRS LQRREISENK AGRSIKACGK GVHFIDNTAD 240 AERDDRPITP CFVAKVDEKR SNLVHVPKDL VTACGIYPEQ TMTILDPGGN KWTTKVKQWQ 300 DGRFIMAGSW KFLFIRNGMR HKDSFLCEFV QGADPSEALI KVYPHRKK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MPLNKLFALV LKADKEVKEA ESCVLYDPGE EEMKAVRQYP AFMKAYFPPD SKQSLKLPSS  60
FTSFLKSSLP DKVFLKNHYD DKRIWAVEVA KIENDLFFQA GWSQFLAENC LEFGDLLVFQ  120
YNGGQEFDFK ILGKTADKRE VIYAFDFSSE EQQEEEYPQE MESENRSRRG AVGLKSKSNS  180
DSGRQEEFEE VSSKKKQKRD FRGSAARKRS LQRREISENK AGRSIKACGK GVHFIDNTAD  240
AERDDRPITP CFVAKVDEKR SNLVHVPKDL VTACGIYPEQ TMTILDPGGN KWTTKVKQWQ  300
DGRFIMAGSW KFLFIRNGMR HKDSFLCEFV QGADPSEALI KVYPHRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	3e-16	B3 family protein