PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027172492.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 354aa MW: 38911.9 Da PI: 9.3296

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027172492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.3	7.4e-54	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ XP_027172492.1 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-SIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTS 108 79**************************.89***********988899***********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_027172492.1 109 gGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 77788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MESTDSSTGS QQPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVSIIAEV DLYKFDPWEL 60 PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTSGG TQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNKTSIK PPGCDIGNKK GSLRLDDWVL CRIYKKNNTP 180 RPMDHDRDDL NDMMPSIPPS FPPSMSMSSQ QKILGLKASN FGALLENEQS AFEVPGMLSS 240 EGNSMSQLTS SGAAKSQLPL VGSASNHVIP AKRALPALYW NDEGNPISPS NKRFLADSSD 300 GNIGRTNNDE NSSIATLLSQ LPQTTSLHQQ AMLGSLGDGV FRQPYQVTGM NWYS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MESTDSSTGS QQPQLPPGFR FHPTDEELVV HYLKKKAASA PLPVSIIAEV DLYKFDPWEL  60
PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTSGG TQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVDNKTSIK PPGCDIGNKK GSLRLDDWVL CRIYKKNNTP  180
RPMDHDRDDL NDMMPSIPPS FPPSMSMSSQ QKILGLKASN FGALLENEQS AFEVPGMLSS  240
EGNSMSQLTS SGAAKSQLPL VGSASNHVIP AKRALPALYW NDEGNPISPS NKRFLADSSD  300
GNIGRTNNDE NSSIATLLSQ LPQTTSLHQQ AMLGSLGDGV FRQPYQVTGM NWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-113	NAC family protein