PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027172552.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 317aa    MW: 35948.5 Da    PI: 9.0537
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027172552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1645.3e-51241513128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPtdeelv +yL++kv +k++++ e ik++diyk++PwdLpk+ + ++kewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+  
  XP_027172552.1  24 PGFRFHPTDEELVGFYLRRKVGKKPISI-ELIKQIDIYKYDPWDLPKASNVGDKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAgg 117
                     9***************************.89***************98889*****************************************965 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_027172552.1 118 eGRDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 151
                     55555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEMETMSSIV TTNSKDEDDD VPLPGFRFHP TDEELVGFYL RRKVGKKPIS IELIKQIDIY  60
KYDPWDLPKA SNVGDKEWYF FCKRGRKYRN SIRPNRVTGS GFWKATGIDR PIYSAGGEGR  120
DCIGLKKSLV YYRGSAGKGT KTDWMMHEFR LPAEHDNIKS TKHIDAKNIA QEAEVWTLCR  180
IFKRNVSYRK CTPDWKEISG KRLNNAVDAS SKTCSMEFDN VRQSYISFSA NVAPAITRQN  240
DKKPLINNNN NSVHGLGHVD ITNQLLMSQL SSFSQAPSST TASYASFASS DATDFLKHGD  300
WDELRSMVEF GAGPTFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-93NAC family protein