PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027173113.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 252aa MW: 28239.1 Da PI: 9.6162

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027173113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.2	1e-29	11	65	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m+++gLt+ hvkSHLQkYR+ XP_027173113.1 11 KERLKWTQELHSLFEKAVNQLGGPDRATPKGILKAMGIPGLTIFHVKSHLQKYRM 65 68****************************************************8 PP
2	Myb_DNA-binding	54.8	2.2e-17	13	64	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++ l+ +av+qlGg+ t+k I + mg g+t ++ks++qky+ XP_027173113.1 13 RLKWTQELHSLFEKAVNQLGGPdraTPKGILKAMGiPGLTIFHVKSHLQKYR 64 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MGASRSDGSS KERLKWTQEL HSLFEKAVNQ LGGPDRATPK GILKAMGIPG LTIFHVKSHL 60 QKYRMSKFIP ESPNRGNRFE RRSISEILPN FSATSGAQLN EALQMQKEVQ KRLSDQLEVQ 120 RSLKMKIEAQ GRFLERIANE HKNRAANAKP SKPYSPAASL PSLCEESDSE VDRNEIRPAV 180 AAAAEFRAAK RIRIEDDDAL LQKCDLESYN NGHQSPFLLR GLNSPCWAHE MGYPWGVATQ 240 SPMLPALYDP LN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-54	G2-like family protein