PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027173318.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

MYB_related

Protein Properties

Length: 804aa MW: 88283.9 Da PI: 5.1557

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027173318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1e-08	745	797	3	46
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 +WT+ E+e+l+++v+ l ++ Wk I + g gRt ++k++w++ XP_027173318.1 745 PWTKAEEEKLKEGVQTLSSPhdrsiPWKQILEFGGdvfqRGRTTIDLKDKWRN 797 8***************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MSAMDLTAVA PEMLNGDVQS FIVHKRASLP KPALQKLKDA ILEGSHSILS SLKERSGLTV 60 TTQCNDDISV NGGNSNVLAQ RLEDCSINNK VTLPYGNAGS PTHDNMDDES QENLPDTNLL 120 PAKRKTAAMR SEIVEIQTDG DQTTLDDCCT SHVQATKKFK QNANFTEDTV VQNAIAPTTH 180 GPSTTLSEGV VRYIEKEGCN SKKEVQCGSS TPQNVDDDLE GNFPESNSLP AKRNRTAIAA 240 ENSEGKTLKD QIPLGDGCDI RGEVVKKFKQ DGNSMMDDID EDTVASPVHG LMKFSSEGTV 300 KHIEKEGCNL ETEVQVGGVE SNGSPHGDDD QHYQLKRIAQ SSHAFHQDHL VCDLQVPHDD 360 AKVAELHAEL DGQNNSVDET NGHDQGFELQ TENATSLAMG VMERNNSPEN PVQNFEGNFQ 420 LSFGGSGSKD DMQHNPDFDM TSDSDDYRDE RMDIAMKKDA LLSSQCTNSQ DSFATQAKYC 480 VKCNKEGQLL VCSSDTCQLA VHSSCLPSAA HFDGKGKFYC PFCAYSRAIS EYMQVKRKAS 540 FARKDLASFI GVQTVCQQKK ATMKLGRESR NELQKNEGNN SEDFVNKVSD SHCGVKMGNK 600 HQSEPPLSCS SDHSHSGEKV VSPSDGMPNT LVSGNLERKY MEPQCQLLGV QVEQPVVAHP 660 VHGSDVDCKE AHMADRNEGN AGAEGKKVSE IPESALPQEP VCGPISESSE EDNEKSVRSY 720 SIRLRRPIKN YTYPAIPQLR RKILPWTKAE EEKLKEGVQT LSSPHDRSIP WKQILEFGGD 780 VFQRGRTTID LKDKWRNICK GGPR

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MSAMDLTAVA PEMLNGDVQS FIVHKRASLP KPALQKLKDA ILEGSHSILS SLKERSGLTV  60
TTQCNDDISV NGGNSNVLAQ RLEDCSINNK VTLPYGNAGS PTHDNMDDES QENLPDTNLL  120
PAKRKTAAMR SEIVEIQTDG DQTTLDDCCT SHVQATKKFK QNANFTEDTV VQNAIAPTTH  180
GPSTTLSEGV VRYIEKEGCN SKKEVQCGSS TPQNVDDDLE GNFPESNSLP AKRNRTAIAA  240
ENSEGKTLKD QIPLGDGCDI RGEVVKKFKQ DGNSMMDDID EDTVASPVHG LMKFSSEGTV  300
KHIEKEGCNL ETEVQVGGVE SNGSPHGDDD QHYQLKRIAQ SSHAFHQDHL VCDLQVPHDD  360
AKVAELHAEL DGQNNSVDET NGHDQGFELQ TENATSLAMG VMERNNSPEN PVQNFEGNFQ  420
LSFGGSGSKD DMQHNPDFDM TSDSDDYRDE RMDIAMKKDA LLSSQCTNSQ DSFATQAKYC  480
VKCNKEGQLL VCSSDTCQLA VHSSCLPSAA HFDGKGKFYC PFCAYSRAIS EYMQVKRKAS  540
FARKDLASFI GVQTVCQQKK ATMKLGRESR NELQKNEGNN SEDFVNKVSD SHCGVKMGNK  600
HQSEPPLSCS SDHSHSGEKV VSPSDGMPNT LVSGNLERKY MEPQCQLLGV QVEQPVVAHP  660
VHGSDVDCKE AHMADRNEGN AGAEGKKVSE IPESALPQEP VCGPISESSE EDNEKSVRSY  720
SIRLRRPIKN YTYPAIPQLR RKILPWTKAE EEKLKEGVQT LSSPHDRSIP WKQILEFGGD  780
VFQRGRTTID LKDKWRNICK GGPR