PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027173476.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 447aa MW: 49939 Da PI: 4.7597

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027173476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	9.2e-35	87	178	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d++l+++isw ++g+sfvv+d+ efa+++Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+ +sF +gk++ll++ XP_027173476.1 87 FLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFASESFLRGKRHLLKN 172 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_027173476.1 173 IQRRKS 178 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MNPHDRDENS VFPSSNSPSS SPPENQSSEV VPLSMVSPFV DLESRQHLQE IVPGILSGGT 60 ITTEAARSFP GMPQPMECLQ GTPVPPFLSK TFDLVDDPAL DSIISWGASG QSFVVWDPVE 120 FARRILPRNF KHNNFSSFVR QLNTYGFRKI DADKWEFASE SFLRGKRHLL KNIQRRKSPH 180 SHQLGGSYGS TGEAGKIVLE GEVEKLRKER SLMMQEVFEL QEQQLGTIQH VEAVNEKLQA 240 AERRQKLMVS FMAKLFQNPD ILDRLKQIKE QKQITSSRTM RKFLKHQPPE FDPGAVEQLP 300 EFTLQEPSGG GFSSQGTEDT LLKGKTVVPP EVIPEYFVTS PDDLAKEKNF PEYSSLDIES 360 MLKEQGPWSM DFEAGAGVSS SSNEIWGNAV NYEIPELMVS SGLSDIWNLG SLPAAGSSGA 420 EKWPDDEFPF SKLDDQVGQH KDESSNF

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MNPHDRDENS VFPSSNSPSS SPPENQSSEV VPLSMVSPFV DLESRQHLQE IVPGILSGGT  60
ITTEAARSFP GMPQPMECLQ GTPVPPFLSK TFDLVDDPAL DSIISWGASG QSFVVWDPVE  120
FARRILPRNF KHNNFSSFVR QLNTYGFRKI DADKWEFASE SFLRGKRHLL KNIQRRKSPH  180
SHQLGGSYGS TGEAGKIVLE GEVEKLRKER SLMMQEVFEL QEQQLGTIQH VEAVNEKLQA  240
AERRQKLMVS FMAKLFQNPD ILDRLKQIKE QKQITSSRTM RKFLKHQPPE FDPGAVEQLP  300
EFTLQEPSGG GFSSQGTEDT LLKGKTVVPP EVIPEYFVTS PDDLAKEKNF PEYSSLDIES  360
MLKEQGPWSM DFEAGAGVSS SSNEIWGNAV NYEIPELMVS SGLSDIWNLG SLPAAGSSGA  420
EKWPDDEFPF SKLDDQVGQH KDESSNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-100	HSF family protein