PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027173516.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TCP

Protein Properties

Length: 148aa MW: 16194.2 Da PI: 8.5106

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027173516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	77.4	3.9e-24	29	100	5	77
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaes 77 k+ +s++h+ v g+dRR+ l++ ca r+F+L ++LG+ ++++t+eWLl qak+++++ +t+ s++++ +++ XP_027173516.1 29 KKASSDRHSNVRGKDRRIVLPIGCADRVFELRKRLGHRTAGQTVEWLLIQAKASVDAVLNTNPSAPQNQ-NGD 100 7889*********************************************************33333122.111 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MVSSNTPSNV PKPSHSSKCV GPRMNNFCKK ASSDRHSNVR GKDRRIVLPI GCADRVFELR 60 KRLGHRTAGQ TVEWLLIQAK ASVDAVLNTN PSAPQNQNGD EMSGSISMSK PILTSASDVE 120 ISADEVARFL FGDHGGYALE EDQQKERE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	2e-18	TCP family protein