PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174014.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 183aa MW: 20130.5 Da PI: 4.8605

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.2	5.8e-54	38	133	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdr+lPianv+rimk++lPanakisk+aket+qec+sefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y+eplk yl+++relege XP_027174014.1 38 KEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDEYAEPLKRYLNRFRELEGE 132 89*******************************************************************************************99 PP NF-YB 97 k 97 + XP_027174014.1 133 R 133 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MVDSIIEGEG EGEGEALNKY KASVAAGCGS GDDGMAIKEQ DRLLPIANVG RIMKQILPAN 60 AKISKEAKET MQECASEFIS FVTGEASDKC HKEKRKTVNG DDICWALGSL GFDEYAEPLK 120 RYLNRFRELE GERANQNKSG NSEEKVMNQN LAEPRKITTH VSPTSINFNV MDESSNSLSR 180 SCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	4e-63	NF-YB family protein