PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174178.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 258aa    MW: 29286.6 Da    PI: 5.603
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.37.5e-20229354128
             NAM  54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + + wyfF+   +ky++g+r++r   + g+Wk tgkdk+++  +g++vg +k+L f       gekt W mheyr+
  XP_027174178.1  22 NVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 93 
                     4579*******************666799*************.999***********5...45678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MRFGVRGFLI DAHRYRSDSL HNVNGWYFFT YLTNKYPKGS RPSRSCGDGG FWKPTGKDKK  60
IYYNGNTVGY RKSLDFLLGP GEKTAWKMHE YRIHANNPKS DPVLCRLYMN IRRKNKDESE  120
GDTVELMREN LDQCFTVNEA PMQNEDNDLA VGNISSAGST NNQCMEYITS TLDTGGDAIS  180
NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP FHLSRGTMIP SDLNMEDVSK  240
YAIGGTDLSD LAWQIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.26e-19NAC family protein