PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174418.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 133aa    MW: 15228.3 Da    PI: 9.2537
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.41.9e-072166147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    +fYn+Y+  vGFsvrk++ +k  ++g it+r+ v   +g ++e  ++
  XP_027174418.1 21 NFYNRYGLVVGFSVRKDYLNKD-KEGVITSRRKVSISQGAQAEIAND 66
                    6******************998.777899999999999998886665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MEEALCLKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKEGVITSR RKVSISQGAQ  60
AEIANDAGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG ETGAMLRYFQ  120
EQKLKNPSFF HVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-08FAR1 family protein