PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174480.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 156aa    MW: 18070.7 Da    PI: 8.8407
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.73.5e-221198189
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    kfYn+YA ++GFsv k++ +k  ++g +t+r++ C keg +++ +++ +  +rtr+ t+t C ak+++ + + + k++v++l+le nHel
  XP_027174480.1 11 KFYNKYAFKMGFSVHKDYLNKD-KDGVTTSRRYSCCKEGVTRKYESD-VMPKRTRVLTKTRCGAKMVIVLLRgTMKYRVHDLVLEYNHEL 98
                    6*****************9998.8999****************9999.999*****************99998****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEFNSEEDAY KFYNKYAFKM GFSVHKDYLN KDKDGVTTSR RYSCCKEGVT RKYESDVMPK  60
RTRVLTKTRC GAKMVIVLLR GTMKYRVHDL VLEYNHELHI AQCSHMMPSQ RKVSEAQGFQ  120
VEISEDAGLS LKQSHEFMGK EIGGMGNVGY TWDDLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-17FAR1 family protein