PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174545.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 137aa    MW: 15800.6 Da    PI: 10.3071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-21857255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a++++eg
  XP_027174545.1  8 HYRGVRQRP-WGKWAAEIRDPK----KpARVWLGTFETAEAAALAYDEAALRFEG 57
                    7********.**********83....58*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MRNQRRRHYR GVRQRPWGKW AAEIRDPKKP ARVWLGTFET AEAAALAYDE AALRFEGNKA  60
RLNFPVRVQG KTEYGYLTTR QDARVVADQQ VSHSHSNRSF PPPHEYPHIL QYAELLRSGD  120
QNNLHDEVIS SSTSSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.12e-21ERF family protein