PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174565.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 244aa    MW: 27680.3 Da    PI: 7.1008
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.11.1e-2673162190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY++YA+++GF +r+++ ++s+ +++i +r++ C+k+g+  + k++    r++r++tr gCka++ vk +k+gkw+vt+++++H+H+l+
  XP_027174565.1  73 EFYDDYARHLGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKMKDQYGPVRKPRSSTREGCKAMMLVKVNKSGKWVVTRFVKDHTHPLV 162
                     6****************************************9999999****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
VPVFTPIDNL ATASADRRPW LGGLPDAQPQ TSLDAGAASV NSSAERQPGA SEEISVQEPY  60
VGMEFDSEDA AKEFYDDYAR HLGFVMRIDQ CRRSEVDKRI LSRRLSCNKQ GYYVKMKDQY  120
GPVRKPRSST REGCKAMMLV KVNKSGKWVV TRFVKDHTHP LVASSRTCRT AMDHKDRKIQ  180
ELTLELERQD KLCDLYHEQI ITFLQSVEEE TGLLSTKIEA AVKNVMEMEA EAKQQSNLQQ  240
AHLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-70FAR1 family protein