PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174616.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 284aa    MW: 32013.7 Da    PI: 7.4757
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-0899146355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  +++rRR+ +N+ f  L  llP +     +K +K+++ ++ v+YI++L+
  XP_027174616.1  99 KKNLLADKRRREILNKQFLALAALLPGL-----TKTDKISVMRESVKYINQLR 146
                     5666789********************9.....9*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDPSINFPFE NLEALLGEDG ELDSFLGENN RFPAFLDQLW ASFFSPDNLS SLGPEHNCPV  60
GDSHPLSSVP DQLLNDTSPC TSSHKNRISS LAARNLQCKK NLLADKRRRE ILNKQFLALA  120
ALLPGLTKTD KISVMRESVK YINQLRKEHN KLKEHNPNQA VVVKKSGVFE EQNGCSIHER  180
SSVCNQEQLP EIEVRMYEKN ILLTIRCQKD KLVLSNIHAE IAKLNLTVIS CDIMSFAGVT  240
YEIIILAEMD TDFSLREKCL VKRLRSALAI HEKLNSSIRS GKNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-29bHLH family protein