PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174617.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 106aa    MW: 12547.7 Da    PI: 9.8989
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-07647855
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +++rRR+ +++ f  L +llP+      +K +K++i e+Av++I++L+
  XP_027174617.1  6 ADKRRRETLKQ-FIVLSTLLPSI-----TKTDKISIIEEAVKHIRQLK 47
                    67888888887.558*******7.....7*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MQKKFADKRR RETLKQFIVL STLLPSITKT DKISIIEEAV KHIRQLKEEI DKLKQYYPKQ  60
AVLAKKSQGF ENQESCSRYE SSLVSCERQL PEIEVRMYEK NILLTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.13e-14bHLH family protein