PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174735.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 536aa MW: 62083.9 Da PI: 7.325

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.7e-20	21	108	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ vGFsvrk++ +k ++g +t+r+++C ke ++ + + + +k +rtraet++ C+ak+ + +++ + k++v +l+ e nH+l XP_027174735.1 21 NFYNKYGLVVGFSVRKDYLNKD-KDGVVTSRRYTCCKEDFKPRYEGD-VKPKRTRAETKIRCEAKMGIILNReTMKYQVRDLVIEYNHTL 108 6***************9998.8999*********9999888.9***************999989************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MEEALCPKIG MEFQSEDEAY NFYNKYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEDFK 60 PRYEGDVKPK RTRAETKIRC EAKMGIILNR ETMKYQVRDL VIEYNHTLHI SECAHMMRSQ 120 RKVSISQGTQ AEIANDTGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG 180 EAGAMLRYFE EQKLENPSCF HAEQLDCEEQ ITNIFWADAS MLLDYTYFGD VVTFDTTYKT 240 NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA 300 AMSAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFAKCMYK IEDENEFIMA 360 WDAMLKEHKL ETNEWLCGIY ACRKKLAKCF MKGAWTAGMR STQLSESLNA SIKNYLKLDH 420 DLNEYDESTT MVILDQKHTT MHVEYSVSHY DGGRERRVIL NPITKDITCS CNLFEQEGIL 480 CSHALKVYDM VGTKFIPDQY VTKRWTKKEG PEAASIARVE NYHQIRLSLF PIDIGY

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MEEALCPKIG MEFQSEDEAY NFYNKYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEDFK  60
PRYEGDVKPK RTRAETKIRC EAKMGIILNR ETMKYQVRDL VIEYNHTLHI SECAHMMRSQ  120
RKVSISQGTQ AEIANDTGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG  180
EAGAMLRYFE EQKLENPSCF HAEQLDCEEQ ITNIFWADAS MLLDYTYFGD VVTFDTTYKT  240
NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA  300
AMSAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFAKCMYK IEDENEFIMA  360
WDAMLKEHKL ETNEWLCGIY ACRKKLAKCF MKGAWTAGMR STQLSESLNA SIKNYLKLDH  420
DLNEYDESTT MVILDQKHTT MHVEYSVSHY DGGRERRVIL NPITKDITCS CNLFEQEGIL  480
CSHALKVYDM VGTKFIPDQY VTKRWTKKEG PEAASIARVE NYHQIRLSLF PIDIGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-80	FAR1 family protein