PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174750.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family E2F/DP
Protein Properties Length: 233aa    MW: 26238 Da    PI: 7.8185
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP69.15.4e-222994171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    r+++sL+l t++f++l++++e+gi++lne+ak+L   ++  ++RRiYDi  VL +++liek+ k+ irw g
  XP_027174750.1 29 RNDRSLGLQTKNFVNLIKHAEDGILNLNEAAKTL---EM--SKRRIYDIKSVLGGIGLIEKELKSTIRWTG 94
                    789*******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSGGNAYGSK VTPSTPLSNA KGGKARSCRN DRSLGLQTKN FVNLIKHAED GILNLNEAAK  60
TLEMSKRRIY DIKSVLGGIG LIEKELKSTI RWTGLGASRQ PDLQAEVENL SMEERRLDDR  120
IRWLFVTFED IKAVPCFQNE TIIAIKAPYS TVLEVPDPFV TCEDIKAVPC FQAVDYPQRR  180
YEMTLRSTMG PIDVYFISQF EDVIDEPIQT RCGGFRGNEA FWSKLFKTNT ILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.15e-67E2F/DP family protein