PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174766.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 342aa MW: 39523.9 Da PI: 7.9893

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.7	9.1e-18	16	104	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ ++++ rl +p f++ ++g+ + + +l+d+ g+ W v+l + ++ ++l+ GW +Fvk+n ++ gDf+vF++dg+ f +v XP_027174766.1 16 FFKVF--IPNTSTERLKIPIAFTKMMQGS--LPDKASLRDRYGNIWPVEL--ARIENAsFFLE-GWAKFVKDNSVELGDFLVFHFDGNCVF--NV 101 89999..55667778******999877..7779***********..66666625555.********************99999..77 PP EEE CS B3 95 kvf 97 k++ XP_027174766.1 102 KLL 104 665 PP
2	B3	37.6	3.8e-12	250	333	10	96
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + +++ l++p + +++h+++ + +++l d++ r+W+ +l+ + gr++ +GW++ ++ n + e D++v ++++r+++ l++ v XP_027174766.1 250 TKRQDELYVPVDVVKDHNLE--FPPEIVLHDPKEREWRARLRRWSD-GRVWYCGGWRSLCRLNLVGEEDICVCEFVKREGGGLRINV 333 567799*********877..6779***********65555.4567777******************9998877676654 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MVKGKRKDDS NRIPAFFKVF IPNTSTERLK IPIAFTKMMQ GSLPDKASLR DRYGNIWPVE 60 LARIENASFF LEGWAKFVKD NSVELGDFLV FHFDGNCVFN VKLLGHTACD KKGVGGRMFK 120 VKEEEENEKE EDEKGENENL QNNYNTVDET DHNEEYNAEE EEEEEEEMRV QQKAKSNQRA 180 AKPKASCKGL KKIKKSINGP PDLVSHKSGT EASKCNLWKA KRIDAYGFNL FKSGKIPQPK 240 NPYFVTKVRT KRQDELYVPV DVVKDHNLEF PPEIVLHDPK EREWRARLRR WSDGRVWYCG 300 GWRSLCRLNL VGEEDICVCE FVKREGGGLR INVTFVRPED LA

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MVKGKRKDDS NRIPAFFKVF IPNTSTERLK IPIAFTKMMQ GSLPDKASLR DRYGNIWPVE  60
LARIENASFF LEGWAKFVKD NSVELGDFLV FHFDGNCVFN VKLLGHTACD KKGVGGRMFK  120
VKEEEENEKE EDEKGENENL QNNYNTVDET DHNEEYNAEE EEEEEEEMRV QQKAKSNQRA  180
AKPKASCKGL KKIKKSINGP PDLVSHKSGT EASKCNLWKA KRIDAYGFNL FKSGKIPQPK  240
NPYFVTKVRT KRQDELYVPV DVVKDHNLEF PPEIVLHDPK EREWRARLRR WSDGRVWYCG  300
GWRSLCRLNL VGEEDICVCE FVKREGGGLR INVTFVRPED LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	8e-20	B3 family protein