PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027175041.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WOX
Protein Properties Length: 260aa    MW: 29353.9 Da    PI: 9.0215
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027175041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.6e-211978357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++tkeq++ Le+l+++  r+psae++++++++l    +++ ++V++WFqN++a++++
  XP_027175041.1 19 SRWNPTKEQIDMLESLYKQgLRTPSAEQIQQITNRLraygHIEGKNVFYWFQNHKARQRQ 78
                    6*****************99**************************************97 PP
2Wus_type_Homeobox115.62.4e-371980465
  Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +RW+Pt+eQi +Le+lyk+GlrtP++e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqkq
     XP_027175041.1 19 SRWNPTKEQIDMLESLYKQGLRTPSAEQIQQITNRLRAYGHIEGKNVFYWFQNHKARQRQKQ 80
                       8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MESHANLDMP ISGGAPGGSR WNPTKEQIDM LESLYKQGLR TPSAEQIQQI TNRLRAYGHI  60
EGKNVFYWFQ NHKARQRQKQ KQDHVSPFNR FLHKTASVLP SCTNVLCSPY YMPYPETGLC  120
HQQQQLSKVL LPRSFKRRPI LPEKLEKSKL LGRALHNQAN QESNDMMHSF RANGECVMSN  180
SKQFNQETLD LFPQQPTGTL QSRTAAAVAS CSFPSNYFGY STATPSTSSA TRSFTDKGGY  240
DDHHPFFDFL CGNNGSCDGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.19e-51WOX family protein