PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027175978.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 383aa MW: 42847.4 Da PI: 8.3025

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027175978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1.1e-51	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+v+yL+kk+++ +l++ +i+ev++yk++PwdLpkk+ +e+ewyfF++rd+ky++g r+nr+++sgyWkatg+dk++ls+ XP_027175978.1 12 LPPGFRFHPSDEELIVHYLRKKATKIPLPA-AIIAEVELYKFNPWDLPKKALFGEDEWYFFTPRDRKYPNGMRPNRMASSGYWKATGTDKPILSS 105 79*************************9.88***********88888999*********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++g kk Lvfy+gr pkg+ktdW+mheyrl XP_027175978.1 106 sGAKVIGAKKALVFYTGRPPKGNKTDWIMHEYRL 139 67778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEKDPLNQEI QLPPGFRFHP SDEELIVHYL RKKATKIPLP AAIIAEVELY KFNPWDLPKK 60 ALFGEDEWYF FTPRDRKYPN GMRPNRMASS GYWKATGTDK PILSSSGAKV IGAKKALVFY 120 TGRPPKGNKT DWIMHEYRLP EATWTAKKER SMRLDDWVLC RVRQKTGTAG NFWEDRNGPA 180 SKETVQCHPK LDKHCPVPMG TTSTAPATAE MVREYPYKDC PMVPFLFGSQ EFACMDTVSN 240 ISFQGSKASS QTGPPCVDSV SNISFEGNKT SSVCGDNFNI DYLQNAVLPS SSSGNGLLHM 300 RKRKNILTIE GNGTEGDISF THPHKKQTYR SEGQMEGNQP QSTSNDTTGT VSCSTNQMEK 360 YNSSVDQLGS ITMCQDLYSL AFA

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEKDPLNQEI QLPPGFRFHP SDEELIVHYL RKKATKIPLP AAIIAEVELY KFNPWDLPKK  60
ALFGEDEWYF FTPRDRKYPN GMRPNRMASS GYWKATGTDK PILSSSGAKV IGAKKALVFY  120
TGRPPKGNKT DWIMHEYRLP EATWTAKKER SMRLDDWVLC RVRQKTGTAG NFWEDRNGPA  180
SKETVQCHPK LDKHCPVPMG TTSTAPATAE MVREYPYKDC PMVPFLFGSQ EFACMDTVSN  240
ISFQGSKASS QTGPPCVDSV SNISFEGNKT SSVCGDNFNI DYLQNAVLPS SSSGNGLLHM  300
RKRKNILTIE GNGTEGDISF THPHKKQTYR SEGQMEGNQP QSTSNDTTGT VSCSTNQMEK  360
YNSSVDQLGS ITMCQDLYSL AFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	3e-79	NAC family protein