PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027176318.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 389aa MW: 44132.5 Da PI: 4.7115

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027176318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.6	1.1e-34	14	107	2	103
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k+ye+++de+++elisws +++nsf+++d ++f++++Lpk+Fkhsnf+SFvRQLn+YgF+k+++++ weF++++F kg++++l+ XP_027176318.1 14 FLLKIYEMVSDESTDELISWSqTHSNSFIIWDVSRFSSELLPKHFKHSNFSSFVRQLNIYGFRKSDTDR---------WEFSNDEFVKGQRHQLK 99 9******************8888************************************9999.........************* PP XXXXXXXX CS HSF_DNA-bind 96 kikrkkse 103 +i r+k++ XP_027176318.1 100 NIVRRKQT 107 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH 60 SNFSSFVRQL NIYGFRKSDT DRWEFSNDEF VKGQRHQLKN IVRRKQTPAQ AQRKSSQQKD 120 ADPGASEEDR RTALRKEVET LKIGKNTLMQ ELIKLKQHQQ TSQSKLVLVR DQLKGMEKNQ 180 QQMLSFIVMV MQNPGFFIQL LQPKENNWRA AETGKHKFSP VDDDCEPLSS DGAIIRYQLP 240 ANEPSEPPCI APSSSSEKSV ELDLSDEIRD LLMSVDFTPL PLDEKMLSLE SHGPLVLPDS 300 PGGDFLMDQL LLSSPLAESK DTDEPDSEVY LDTGMDIESA FQAQESNKLK SPEDGSNQNR 360 WVDTTGIRKQ LDNLESLDFL TVQMGSLNS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MVKSLENGSS VAPFLLKIYE MVSDESTDEL ISWSQTHSNS FIIWDVSRFS SELLPKHFKH  60
SNFSSFVRQL NIYGFRKSDT DRWEFSNDEF VKGQRHQLKN IVRRKQTPAQ AQRKSSQQKD  120
ADPGASEEDR RTALRKEVET LKIGKNTLMQ ELIKLKQHQQ TSQSKLVLVR DQLKGMEKNQ  180
QQMLSFIVMV MQNPGFFIQL LQPKENNWRA AETGKHKFSP VDDDCEPLSS DGAIIRYQLP  240
ANEPSEPPCI APSSSSEKSV ELDLSDEIRD LLMSVDFTPL PLDEKMLSLE SHGPLVLPDS  300
PGGDFLMDQL LLSSPLAESK DTDEPDSEVY LDTGMDIESA FQAQESNKLK SPEDGSNQNR  360
WVDTTGIRKQ LDNLESLDFL TVQMGSLNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-81	HSF family protein