PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027176341.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 252aa    MW: 28744 Da    PI: 6.0392
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027176341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.19.4e-4641341127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     lppGfrF Pt+eel+++yL+ k++g++ ++++vi+ vdiy+++PwdLp+    +++++ ++w+fF++ + ++a+g r+nr t++gyWkatg+   
  XP_027176341.1   4 LPPGFRFYPTEEELISFYLHSKLDGRRQDIDTVIPVVDIYDHKPWDLPQfageCCRGDPEQWFFFIPMQDREARGGRPNRLTTEGYWKATGSPGC 98 
                     79****************************999***************656766666888*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     v+s++++ +g+k+t+vfykgrap+gekt+W m+ey+
  XP_027176341.1  99 VYSSQNRIIGVKRTMVFYKGRAPNGEKTQWKMNEYK 134
                     ***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MENLPPGFRF YPTEEELISF YLHSKLDGRR QDIDTVIPVV DIYDHKPWDL PQFAGECCRG  60
DPEQWFFFIP MQDREARGGR PNRLTTEGYW KATGSPGCVY SSQNRIIGVK RTMVFYKGRA  120
PNGEKTQWKM NEYKAIDGEA SSAAPPKLRQ EMSLCRVYIG SKSLRAFDRR PPPPPGETSS  180
HHRQPHHQED QPATITSHQT HPPSLAAEIA SSTSGSGEDN FLASSSQGME NESHDLAFNP  240
EPMWDWEQLN WF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-82NAC family protein