PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177056.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 218aa    MW: 24045.9 Da    PI: 4.621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-173584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  XP_027177056.1 35 KYTGVRKRK-WGKYVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 84
                    89****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVKPAAQKRS SSPPSTAATL ERFKVAGDHS SSSIKYTGVR KRKWGKYVSE IRLPNSRERI  60
WLGSYDTAEK AARAFDAALF CLRGKLAKFN FPDNPPEIVN GRSMTPAEIQ VAAAQFANSE  120
HRLIGEPARI DNLVSDNSSS SISSLELQAE SPCPSVSDGV VQLESELPEI PLDNAFLDMF  180
GIFPGFDDFF VPPMPTVDLD GEENFEGYFS QDSTLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-51ERF family protein