PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177058.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 289aa    MW: 33138.1 Da    PI: 8.1072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23e-08107150755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +E+rRR+ +N+ f  L +llP       +K + ++i  +A +YI++L+
  XP_027177058.1 107 LAEKRRRETLNKQFIALSTLLPGI-----TKTDRISIMGEALKYINQLK 150
                     68********************97.....7*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDPFTDFSPE DIEATLGDNC ELDYFLEEKD LFPAFLDQLF SGNSFFTPEN LSSPCKSSSS  60
RVDRIDDILP LSSMPEQLND KSPCTSNQKN KIPSLAARRL QYKKNLLAEK RRRETLNKQF  120
IALSTLLPGI TKTDRISIMG EALKYINQLK EENNKLKQYN PNQAVVVKKS QVHEEQRSCS  180
ITKSSSVCSD EQLPEIEVRM YEKKILLTIR CEKEKDVLAN ILSEIEKLNL TVISGNIIPF  240
VGITYEIIIV AEMDNDFSIS QKNLVKRLHS AHFLHKKLNS TIRKRKTYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.18e-31bHLH family protein