PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177311.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family E2F/DP
Protein Properties Length: 317aa    MW: 35365.4 Da    PI: 8.4778
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP85.73.5e-27145210171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  XP_027177311.1 145 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 210
                     6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSTPQAPSRG AAAGGRQIPQ PIKRHLPFSS MKPPFVPPED YHRFSTPAGA GTETVRIQDA  60
EAIVVKSPPI KRKSRTDNHE VSSTDWAASP GNTRTVSSPI CTPVSAKGGK AYGRSKVTKG  120
DMSGPSTPLS NAGSPAPLTP AGSCRYDSSL GLLTKKFINL IKHAEDGILD LNKAAETLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIHWKG LDASRPDEVE NDASILQAEV ENLSMEERRL  240
DDRIREMRER LRDLSEDEIN EKWLFVTEED IKTLPCFQVL FYCLVMRQCP FNVLVRQIIW  300
KEVHLDHRHN ILLPGAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.12e-97E2F/DP family protein