PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177383.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 358aa MW: 39061.2 Da PI: 6.1801

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.7	3.9e-36	14	69	7	62
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk ++++ XP_027177383.1 14 ACPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKGRRRN 69 7**************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MERGWKPNVE ISPACPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPVGG 60 GCRKGRRRNN RTFRDGATTI GIPLRAAVAG DGAVVSLGHI NGTTTNPLIL SESSTSSMHG 120 CTFARAREEG STDIDLALVY ANFLNQKSAG AGAHEVDDQI HEGAAAEPHD RHRLEIPILM 180 PPNNIAAVGV GGGSSFHQFS SVESLQMMDL MTNNNQLSQE PFAERGSVSD RSSDNHFGAG 240 DAFYFSGLDS IERQQVATDY DHLTSCATTD TSNALNQINN YMLPPLPGEE LSTAHSEGMV 300 WSGCCDQELL FPSHKFHGNQ SSSGLVESHV VQDRSNDQLD ESRSPFNLSI ELCNIFRP

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MERGWKPNVE ISPACPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNVPVGG  60
GCRKGRRRNN RTFRDGATTI GIPLRAAVAG DGAVVSLGHI NGTTTNPLIL SESSTSSMHG  120
CTFARAREEG STDIDLALVY ANFLNQKSAG AGAHEVDDQI HEGAAAEPHD RHRLEIPILM  180
PPNNIAAVGV GGGSSFHQFS SVESLQMMDL MTNNNQLSQE PFAERGSVSD RSSDNHFGAG  240
DAFYFSGLDS IERQQVATDY DHLTSCATTD TSNALNQINN YMLPPLPGEE LSTAHSEGMV  300
WSGCCDQELL FPSHKFHGNQ SSSGLVESHV VQDRSNDQLD ESRSPFNLSI ELCNIFRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	6e-32	Dof family protein