PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177412.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TCP

Protein Properties

Length: 229aa MW: 24705.8 Da PI: 7.2158

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.6	9.1e-34	66	131	6	71
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssas 71 ++ +++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+pa+ ++tg+++ +++ XP_027177412.1 66 KKPKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPAVVAATGSGTFPKT 131 6789********************************************************666652 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MVLHPRTNGS HSQAKDNVPD PDLSATSPDL QLLSSVAAAA ADDDDPNASS LSIIEQQQPE 60 QSVPPKKPKD RHTKVNGRGR RVRMPALCAA RIFQLTRELG HRSDGETIEW LLRQAEPAVV 120 AATGSGTFPK TMVTSVGSLP PSHLNVSTYA TVTRVQPSAV VIPGMGGFFA VPPPPRCRLD 180 LRQPPPTELS GGINAYSQMP YTALLLEPSP RGEEHAESSA KNRDDFWHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	3e-38	TCP family protein