PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177578.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 190aa    MW: 21545 Da    PI: 7.6048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-1855105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f ++eeAa a+++a+ +++g
  XP_027177578.1  55 QYIGVRKRP-WGKYAAEIRDSTRNG--MRVWLGTFESPEEAALAYDQAAFSMRG 105
                     799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDSSSYENPT PDQNFSSEFS FWFLDNNRVP KQELETTEAI QSLNLKRDSK RQEKQYIGVR  60
KRPWGKYAAE IRDSTRNGMR VWLGTFESPE EAALAYDQAA FSMRGPLASL NFPMDRVQKS  120
LEGIKHNWEN GCSPAAVLKA THKIRSSMSK RARRNQEKQG EKVVVELQDL GADLLEELLS  180
SSSESAASSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-49ERF family protein