PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177580.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 232aa    MW: 25995.4 Da    PI: 6.0143
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.41.6e-24171471128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeek.ewyfFskrdkkyatgkrknratksgy 82 
                     lp G+rF Pt+++++ +yLk+k+ g +l++ ++i+++d+y+++P +Lp             k+k +   ew+fF++r             t++gy
  XP_027177580.1  17 LPFGYRFYPTNDQVI-HYLKQKILGGELPA-DIIPTIDVYSHNPDQLPLgmfyvlmllfnyKFKYGVAgEWFFFTNRLAGD-------LPTTDGY 102
                     689************.**************.99***************55799999998875555555699***9986643.......34678** PP

             NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     W+  g   e+   +++ +g k+   fy g++p+g+k++W++ eyrl
  XP_027177580.1 103 WSPAGLPAEIGL-DNRIIGFKQAVDFYWGHSPNGTKSNWTIYEYRL 147
                     ************.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAHPRNSSGD GKQVLNLPFG YRFYPTNDQV IHYLKQKILG GELPADIIPT IDVYSHNPDQ  60
LPLGMFYVLM LLFNYKFKYG VAGEWFFFTN RLAGDLPTTD GYWSPAGLPA EIGLDNRIIG  120
FKQAVDFYWG HSPNGTKSNW TIYEYRLNPD QLDGKVDETT QVKVQNFAAC RVRNNDKFQP  180
TATGGAIQER IGSLPTNELE FLSSAVMDGA NELAIMPDGK ETAPLISAHR KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-27NAC family protein