PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177589.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 125aa    MW: 14693 Da    PI: 9.8804
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1416.1e-1352122171
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkke 71 
                     +fY  ++k+vGF +r + +kk  ++g +t +++vC++eg+r+++  +  +++++ +   r+gC a++ v+ +
  XP_027177589.1  52 EFYLCHSKMVGFGIRERDEKKD-QKGIVTYKWWVCNREGFRNSKWLNlVNRKKEAKRLMRVGCLATIIVQWN 122
                     69**************999887.7778****************99986788888999**********99866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MTVHIDELVQ LSNKSAKFGG GISWRTIVDQ LNKLSSDEIQ LLTFDSIEDV REFYLCHSKM  60
VGFGIRERDE KKDQKGIVTY KWWVCNREGF RNSKWLNLVN RKKEAKRLMR VGCLATIIVQ  120
WNKDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-06FAR1 family protein