PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177662.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 845aa MW: 96592.6 Da PI: 7.6906

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.8	1.4e-21	87	177	2	89
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYn Y++ +GFs+r+ + kk ++ +++ r +vCs+eg+r+e++ ++++r+ +a+tr++C a+lk+++++ +gk+ v+ +++eHnH+l XP_027177662.1 87 FYNIYGRATGFSIRRGYAKKDpEDGTTVRYRSWVCSREGERDEKHILrNDRKREAKAVTRVNCGACLKIRLDDnEGKYIVSCFVKEHNHQL 177 9*****************955556677789*****99986556889999*************99*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 845 aa Download sequence
MEQDMDENGH RKGKGHIFDL NAYAHCEDDI IAWKWMCGEM GAEDSKADEK MNNMVNGGAI 60 DAENVDDLQE VDLMTMKFDT IEDAECFYNI YGRATGFSIR RGYAKKDPED GTTVRYRSWV 120 CSREGERDEK HILRNDRKRE AKAVTRVNCG ACLKIRLDDN EGKYIVSCFV KEHNHQLGNH 180 ASIPFMRSHR KVADSDYAQA HTLRRAGIRT SQIMKLFVLQ AGGYQNVPFL IKDLYNKMNC 240 ERLREIADGD AERAIGRLAA KKETDNNFYY EYCCDSKGRL TRLLWADSWS RMDYKCYGDV 300 LVFDSTYRTQ SYKMPLVVLC GVNNHYSTAI FACALIADEN EESYDWVLEK FVECMGGKEP 360 VSIVTDGDKA MKKAIKKVLP NAAHRLCSWH LEKNAGQYVG NKQFLQAFKT CMFMNCSQDQ 420 FEFEWASMVS KLHLGNNEWV KKIHKKKEQW AVAYLRGNFF AGMRSTQRCE KMNDVLKMYL 480 KPELKLFEFV RAFDLAISWL RTEEARNEAN TQHTTLLPIT ELHCLENHAA EVFSRRIFLM 540 VREQLKSQGM YCRVDGIDDG VQCVHMVSHS YSGSEWRVQY NRRSGEMRCS CMRMESLGLP 600 CGHMFRIMVF EGMRKIPDSC IMKRWTRMAR DGIGGDWEGQ PPDTENLEMG RYAALVGACN 660 SWCYYAAKSS AGFKHAMGVI HRETDHARSL CMVKAIDAAT LLRHEAGGQR GSKFGVLDPL 720 ICRAKGDHQT KEKGRQSNKK CGNCGSRDGH NRRTCNSSPK NTAWHEITGA SYDGEHGWTA 780 DEDAGSRHQS IISHYGVRVC SLSKGQYGSL IQQPSYEWNQ KGFAGVQEGR CNELDAMDSL 840 ELAEW

Sequence ? help Back to Top

Protein Sequence Length: 845 aa Download sequence

MEQDMDENGH RKGKGHIFDL NAYAHCEDDI IAWKWMCGEM GAEDSKADEK MNNMVNGGAI  60
DAENVDDLQE VDLMTMKFDT IEDAECFYNI YGRATGFSIR RGYAKKDPED GTTVRYRSWV  120
CSREGERDEK HILRNDRKRE AKAVTRVNCG ACLKIRLDDN EGKYIVSCFV KEHNHQLGNH  180
ASIPFMRSHR KVADSDYAQA HTLRRAGIRT SQIMKLFVLQ AGGYQNVPFL IKDLYNKMNC  240
ERLREIADGD AERAIGRLAA KKETDNNFYY EYCCDSKGRL TRLLWADSWS RMDYKCYGDV  300
LVFDSTYRTQ SYKMPLVVLC GVNNHYSTAI FACALIADEN EESYDWVLEK FVECMGGKEP  360
VSIVTDGDKA MKKAIKKVLP NAAHRLCSWH LEKNAGQYVG NKQFLQAFKT CMFMNCSQDQ  420
FEFEWASMVS KLHLGNNEWV KKIHKKKEQW AVAYLRGNFF AGMRSTQRCE KMNDVLKMYL  480
KPELKLFEFV RAFDLAISWL RTEEARNEAN TQHTTLLPIT ELHCLENHAA EVFSRRIFLM  540
VREQLKSQGM YCRVDGIDDG VQCVHMVSHS YSGSEWRVQY NRRSGEMRCS CMRMESLGLP  600
CGHMFRIMVF EGMRKIPDSC IMKRWTRMAR DGIGGDWEGQ PPDTENLEMG RYAALVGACN  660
SWCYYAAKSS AGFKHAMGVI HRETDHARSL CMVKAIDAAT LLRHEAGGQR GSKFGVLDPL  720
ICRAKGDHQT KEKGRQSNKK CGNCGSRDGH NRRTCNSSPK NTAWHEITGA SYDGEHGWTA  780
DEDAGSRHQS IISHYGVRVC SLSKGQYGSL IQQPSYEWNQ KGFAGVQEGR CNELDAMDSL  840
ELAEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-92	FAR1 family protein