PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177672.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GeBP
Protein Properties Length: 128aa    MW: 14297.2 Da    PI: 6.9585
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57347.55e-152534697
          DUF573 46 sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                    s  ++ksql+eK+rrL+kKf+  ++++++g ++sf ++hd+  fe+sk++W+
  XP_027177672.1  2 SQPYTKSQLSEKLRRLRKKFRVISSRISKGLDQSFLSPHDRALFEISKRLWH 53
                    67899**********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MSQPYTKSQL SEKLRRLRKK FRVISSRISK GLDQSFLSPH DRALFEISKR LWHPDYADTS  60
PFGGVSGGKA TKSDLVGVEV SFLPEILSGL DPNEVENIEL KWEKSDNVVE GVDFGDMCHA  120
PSPHVPVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-13GeBP family protein