PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177693.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 360aa MW: 41387 Da PI: 8.809

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	88.4	9.1e-28	140	237	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskk 94 f r+++e+Dei +LqG+id+++ +++ + s++++a+yef+k++++f+++k+q+ KirrLK+ + k +k + sg++p+f ++h++ +felskk XP_027177693.1 140 SFARVFTEKDEIDILQGVIDYAKLQNVtDLSAHTNAVYEFLKGKLHFEFTKTQVYGKIRRLKNNYLKILEKrKGSGNDPVFLSPHESISFELSKK 234 689****************88777747788*******************************99885679**************** PP DUF573 95 iWg 97 +Wg XP_027177693.1 235 LWG 237 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MTRRSQTTNA EGDALQGEEI PEEEEDKLEN DRIPQTQHGK EISEAALQGE EIPEEDQEEK 60 ERIPQTQQAA VREASPRPTQ YRPTSGTGSD SDAPQKHSFK RAKRDQKDGA RKNKTRKDVV 120 IGARKKENQK KASVYATPSS FARVFTEKDE IDILQGVIDY AKLQNVTDLS AHTNAVYEFL 180 KGKLHFEFTK TQVYGKIRRL KNNYLKILEK RKGSGNDPVF LSPHESISFE LSKKLWGGVD 240 FVDDVKSGMK KKMDGKKAMV RKLQLKHDDE VNVEEDQGGF KPNHPFLEES SDVKNLELLW 300 MPESLKVFMR GNMTLIDCEK AKELEVKWKE LRRKEIELFL MKLNLRMELI NHVLDAMKKG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MTRRSQTTNA EGDALQGEEI PEEEEDKLEN DRIPQTQHGK EISEAALQGE EIPEEDQEEK  60
ERIPQTQQAA VREASPRPTQ YRPTSGTGSD SDAPQKHSFK RAKRDQKDGA RKNKTRKDVV  120
IGARKKENQK KASVYATPSS FARVFTEKDE IDILQGVIDY AKLQNVTDLS AHTNAVYEFL  180
KGKLHFEFTK TQVYGKIRRL KNNYLKILEK RKGSGNDPVF LSPHESISFE LSKKLWGGVD  240
FVDDVKSGMK KKMDGKKAMV RKLQLKHDDE VNVEEDQGGF KPNHPFLEES SDVKNLELLW  300
MPESLKVFMR GNMTLIDCEK AKELEVKWKE LRRKEIELFL MKLNLRMELI NHVLDAMKKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	118	RKNKTRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-19	GeBP family protein