PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178002.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 228aa MW: 26210.3 Da PI: 10.7215

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	126	149	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++ +Lk+H r H XP_027178002.1 126 YICSVCGRKCKTHLDLKKHFRQlH 149 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
KPPKPLSLSD PNSSGKWANI RACAAEAAAE SEIDMVRTKE GIYTAKPKKV VVLWDLDNKP 60 PRGPPYQAAM ALKKVAQHFG NLVDISAYAN RHAFIHLPQW VVEERRERRR MDILERKGVS 120 TPSEPYICSV CGRKCKTHLD LKKHFRQLHE RERQKKLNRM RSLKGKKRQR FKERFIDGNE 180 KYNEAARTLT SPKVGYGLAS ELRRAGVFVK TVEDKPQENF TNIPKPHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-104	C2H2 family protein