PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027178186.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 132aa    MW: 15547.4 Da    PI: 7.9355
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027178186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.31.6e-144851294
                    HTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3 12 ksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                    +++ l++p  f+++   +++++++++   +++  +sW v++  rkk++  y+ +  W +Fvk+++Lk gD ++F+l+++++f  +v
  XP_027178186.1  4 SEKKLRIPYAFVRNLkeKLSSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF--RV 85
                    67789*******8778777777877777778888*******..888888677889*********************987766..44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MIFSEKKLRI PYAFVRNLKE KLSSRCTIES EAKNSVRNSW PVRIRKKGRY YYICRLSWPK  60
FVKDHHLKLG DYLLFHLIDK TTFRVKPYGA DCCPKKFNVY NSSSSSSDDE SDDGSDDSFD  120
DSDETEFYSL DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16640.12e-08B3 family protein