PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178188.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 148aa MW: 17531.6 Da PI: 5.7432

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.4	7.3e-15	11	101	1	94
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k l+ +d +++ +++p f+++ +++++++++ +++ +sW v++ rkk++ y+ + W +Fvk+++Lk gD ++F+l+++++f XP_027178188.1 11 FIKLLM-EDDFTRE-IRIPYAFVRNLkeKLSSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF-- 99 566664.4555555.8*****8778777777877777778888***..888888677889*******************987766.. PP EE CS B3 93 vv 94 +v XP_027178188.1 100 RV 101 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MEQNFNFNPS FIKLLMEDDF TREIRIPYAF VRNLKEKLSS RCTIESEAKN SVRNSWPVRI 60 RKKGRYYYIC RLSWPKFVKD HHLKLGDYLL FHLIDKTTFR VKPYGADCCP KKFNVYNSSS 120 SSSDDESDDG SDDSFDDSDE TEFYSLDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	2e-09	B3 family protein