PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178208.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 227aa MW: 26263.4 Da PI: 6.4394

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	59.6	8.7e-19	91	182	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 fqr+w +Dei lL +id +++ ++p + d f ++ ++ +sf+ ++ ql eKir+L++K+kk+ k+ ++ +++ h+ fels+k+W XP_027178208.1 91 PFQRIWMRDDEIDLLHIMIDRMEQNAAQPRSYEDIFSHIREHPLSFQPTRIQLKEKIRHLREKYKKNAKE----PQKFIKSYHEVRLFELSSKVW 181 69*****************999999999999999999999********************9999....88899************** PP DUF573 97 g 97 g XP_027178208.1 182 G 182 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MSHHTPAMSL GESVYEYNSD NKKIMGIIHE AKLQESSHED DTNCGKPLDR KLSNSSMNVP 60 VTEEDVKDAE CFSKLDSSNN VDSRGKVQEK PFQRIWMRDD EIDLLHIMID RMEQNAAQPR 120 SYEDIFSHIR EHPLSFQPTR IQLKEKIRHL REKYKKNAKE PQKFIKSYHE VRLFELSSKV 180 WGVEQSDFLQ SSGTIKGNCH SKAKEILEDE KDTFAVTSNS ALHEQVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	2e-17	GeBP family protein