PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178424.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 651aa MW: 72042.7 Da PI: 4.8104

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	7.2e-50	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd el+++yLk+kv gkk+++ e+i+e++iyk+ PwdLp k ++k+++ ewyfF++r++kya+g+r nr+t++gyWk+tgkd++v+ XP_027178424.1 6 LPPGFRFHPTDVELLMYYLKRKVMGKKIPF-EAISELNIYKFSPWDLPdKsCLKSKDLEWYFFCPRERKYASGSRMNRSTETGYWKTTGKDRRVT 99 79**************************.89**********96347788888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+ ktLvf++g ap+g++tdWv+heyr+ XP_027178424.1 100 Y-NKNSVGMVKTLVFHQGCAPSGQRTDWVIHEYRI 133 .9999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 651 aa Download sequence
MVRTSLPPGF RFHPTDVELL MYYLKRKVMG KKIPFEAISE LNIYKFSPWD LPDKSCLKSK 60 DLEWYFFCPR ERKYASGSRM NRSTETGYWK TTGKDRRVTY NKNSVGMVKT LVFHQGCAPS 120 GQRTDWVIHE YRIEDKNLAD MGVAQDAYVL CKLFHKSGPG PKNGASYGAP FREEDWDDDE 180 EIPVDSLLPG GPSTVEPVQP ENDNSSAAIS LVDLGNAPLM RPNEPGPSFV QPSKDTVLSN 240 GQNSSMVTRV VDTGNASGWS LSEAGLTSAS HSGNGMDMDP PDDDILHLLA AFSEDSPLLP 300 TVNGNIELGD LGQGRAVEAI PHSDGGDLFS GLEDLSNLAE LNGGGLNLFD NYQIGYTTNN 360 MRLQDDSGFL ELNDLDAPLN FTAQSCGPEQ MHTGGLYRPS NSSGSEHVFA GSLCTEYNTS 420 NHTWNGDNIP GYEQHPTDLH HLLVLPDASD IQGNSTSIFP MGNVYDSTNA AYNLDFTTNR 480 PLEDIRNAAG NQERGAQQRT PHYSRLQQLL ESVPADPASA AYDGSSIHVK AEVTYRFATC 540 TKDALSVMVG ESTFVFSPWW NLPVLGFQKA VGYRGCGSPV VFCLRLDSAF VCMLMFSLLR 600 EFVWYLWSWF CFCEIIGCFK TIHQFVLTHQ RAHVLSIKSM DFINFVSVLC S

Sequence ? help Back to Top

Protein Sequence Length: 651 aa Download sequence

MVRTSLPPGF RFHPTDVELL MYYLKRKVMG KKIPFEAISE LNIYKFSPWD LPDKSCLKSK  60
DLEWYFFCPR ERKYASGSRM NRSTETGYWK TTGKDRRVTY NKNSVGMVKT LVFHQGCAPS  120
GQRTDWVIHE YRIEDKNLAD MGVAQDAYVL CKLFHKSGPG PKNGASYGAP FREEDWDDDE  180
EIPVDSLLPG GPSTVEPVQP ENDNSSAAIS LVDLGNAPLM RPNEPGPSFV QPSKDTVLSN  240
GQNSSMVTRV VDTGNASGWS LSEAGLTSAS HSGNGMDMDP PDDDILHLLA AFSEDSPLLP  300
TVNGNIELGD LGQGRAVEAI PHSDGGDLFS GLEDLSNLAE LNGGGLNLFD NYQIGYTTNN  360
MRLQDDSGFL ELNDLDAPLN FTAQSCGPEQ MHTGGLYRPS NSSGSEHVFA GSLCTEYNTS  420
NHTWNGDNIP GYEQHPTDLH HLLVLPDASD IQGNSTSIFP MGNVYDSTNA AYNLDFTTNR  480
PLEDIRNAAG NQERGAQQRT PHYSRLQQLL ESVPADPASA AYDGSSIHVK AEVTYRFATC  540
TKDALSVMVG ESTFVFSPWW NLPVLGFQKA VGYRGCGSPV VFCLRLDSAF VCMLMFSLLR  600
EFVWYLWSWF CFCEIIGCFK TIHQFVLTHQ RAHVLSIKSM DFINFVSVLC S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	3e-87	NAC family protein