PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178608.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 412aa MW: 45410.2 Da PI: 5.243

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	119	2.5e-37	188	285	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95 lfqrlwse+Dei++L+G++d+ ak++++p +d++af ef+kk+i+ +vsk+ql +KirrLKkK++++ ++ +k +ke +fsk+h+qk++e+skk+ XP_027178608.1 188 LFQRLWSEDDEIAILKGMLDYSAKKKADPINDLNAFLEFIKKNIHTDVSKTQLQDKIRRLKKKYENNAEReKKGNKELTFSKPHEQKAYEFSKKV 282 79****************************************************************9955667899*************** PP DUF573 96 Wgs 98 Wg+ XP_027178608.1 283 WGK 285 *95 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAKPRETAKP DPTVESEEEE ESGEEEEEGS SEESESQPEN EPSEKKTAST PAPATKKPES 60 ATPKTQPTSA AAAASSSDES EDEESGSDTD SDTETPSEKP DPSIKPIASK PMDGPQKTTT 120 TAKKPRSKPN ALGPASPAKS TTGAGAKRTA SAAGSDEGKD AKRSKKKPEA EAESSERKGN 180 SNDDSRRLFQ RLWSEDDEIA ILKGMLDYSA KKKADPINDL NAFLEFIKKN IHTDVSKTQL 240 QDKIRRLKKK YENNAEREKK GNKELTFSKP HEQKAYEFSK KVWGKEKNGD GEENVESTKA 300 NGTAVRKSRS RSAVVGMTPK VDEVEEKLKE VKDLVGEKNV VEGLKNESFG PTDSLRIEEW 360 VLKNGAHLIK DAKKRAELEE KWRELKVKEI ELLARRSELM AEQSNLVLEG LK

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAKPRETAKP DPTVESEEEE ESGEEEEEGS SEESESQPEN EPSEKKTAST PAPATKKPES  60
ATPKTQPTSA AAAASSSDES EDEESGSDTD SDTETPSEKP DPSIKPIASK PMDGPQKTTT  120
TAKKPRSKPN ALGPASPAKS TTGAGAKRTA SAAGSDEGKD AKRSKKKPEA EAESSERKGN  180
SNDDSRRLFQ RLWSEDDEIA ILKGMLDYSA KKKADPINDL NAFLEFIKKN IHTDVSKTQL  240
QDKIRRLKKK YENNAEREKK GNKELTFSKP HEQKAYEFSK KVWGKEKNGD GEENVESTKA  300
NGTAVRKSRS RSAVVGMTPK VDEVEEKLKE VKDLVGEKNV VEGLKNESFG PTDSLRIEEW  360
VLKNGAHLIK DAKKRAELEE KWRELKVKEI ELLARRSELM AEQSNLVLEG LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	1e-30	GeBP family protein