PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027178675.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family BES1
Protein Properties Length: 317aa    MW: 33747.7 Da    PI: 9.0567
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027178675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222169.1e-6791532150
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     +sgr ptwkErEnnkrRERrRRaiaaki++GLRaqGnyklpk++DnneVlkALc eAGw+vedDGttyrkg kp+   e +g+sas+s +ss+q 
  XP_027178675.1   9 SSGRLPTWKERENNKRRERRRRAIAAKIFSGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEDDGTTYRKGGKPP-LVELTGASASISACSSIQP 102
                     89*************************************************************************.9****************** PP

          DUF822  97 slkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                     s+ ss+++sp++sy+asp sssfpsps+ d+++    + +lp+l++l+++++sl
  XP_027178675.1 103 SPASSSFPSPAPSYHASPGSSSFPSPSRGDTNPP---SYILPFLHNLASIPNSL 153
                     *******************************987...599*****999998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MTAAGGGSSS GRLPTWKERE NNKRRERRRR AIAAKIFSGL RAQGNYKLPK HCDNNEVLKA  60
LCSEAGWIVE DDGTTYRKGG KPPLVELTGA SASISACSSI QPSPASSSFP SPAPSYHASP  120
GSSSFPSPSR GDTNPPSYIL PFLHNLASIP NSLPPLRISN SAPVTPPLSS PTRGSKRKPD  180
WEPLSHIKLP PSLPHSLFAA SAPSSPTRRQ HFTPATIPEC DESDISPVES ARWVSFQTAP  240
AAPSSPTFNL VKPATLQNHQ DVVDGRGQFP WGAGAQRGCG SEFAFESCTV KAWEGERAHE  300
IGVDDLELTL GSGKAHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.37e-79BES1 family protein