PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179031.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Nin-like
Protein Properties Length: 352aa    MW: 40359.7 Da    PI: 8.5989
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.93e-26225274352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +++ ledl+kyF+lpi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  XP_027179031.1 225 ARLALEDLAKYFDLPIIEASKNLKVGLTVLKKKCREFGIPRWPHRKIKSL 274
                     6899********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MASLQASPPL KALVVFRNRI HKELIRSIHV YQLEGGAEEV VEREYLFLEN LEYEEMKFLG  60
KVFTLQKFDV SAHFAGMANG VWDCIYVFNM DLDKQPNLEM IPEDLSITRN PKLASIPSLS  120
NDLQMIFKLG HKIECGDPSK VLPKEGEEIH SDVGHLTQRA QHVPVLDLNS LPCSGSDNEE  180
NNQNAAVIHR IEAERLVHVG SVLLKWKIAG VVEKKQKRAA TKDIARLALE DLAKYFDLPI  240
IEASKNLKVG LTVLKKKCRE FGIPRWPHRK IKSLDSLIQD LQGEVKRQLE EDEAAAMAVA  300
KRQRMIESEK ESIEKKPFLD IQWETKKFRQ DIFKRRHRAR ALENQSRTLS LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.16e-71Nin-like family protein