PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179113.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 204aa MW: 23247 Da PI: 8.3199

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	1.9e-30	117	175	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+Y++C+s gC+vkk+ver+++dp++v++tYeg Hnh+ XP_027179113.1 117 MDDGYKWRKYGKKMVKNSPNPRNYFKCSSGGCHVKKRVERDRDDPSYVITTYEGVHNHD 175 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MDASLCMFPN PNPTAGVMPD ISQHVDHHQH HQTSSEFQFS DYFMMQDYYS FDQDAHLASQ 60 NTVDQYQQNV TSNITVESNH PSATASNMKQ KSGITKKRAV EMGRKVAFRT KSKLDVMDDG 120 YKWRKYGKKM VKNSPNPRNY FKCSSGGCHV KKRVERDRDD PSYVITTYEG VHNHDSPCVV 180 YHLPPMMPMG GFSLQESYTP SSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	8e-42	WRKY family protein