PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179157.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 320aa    MW: 37264.1 Da    PI: 5.7748
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.8e-51191431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+GfrFhPtdeelv++yL++k++++++++  +i+e+d+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + 
  XP_027179157.1  19 LPAGFRFHPTDEELVMHYLCRKCAAQPISA-PIIAEIDLYKFDPWELPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK- 111
                     799*************************99.88***************7666789*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ g+kk Lvfy g+apkg kt+W+mheyrl
  XP_027179157.1 112 -PKALGIKKALVFYAGKAPKGIKTNWIMHEYRL 143
                     .778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEYRGQRRTM DGDDLELSLP AGFRFHPTDE ELVMHYLCRK CAAQPISAPI IAEIDLYKFD  60
PWELPEMALY GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPIG KPKALGIKKA  120
LVFYAGKAPK GIKTNWIMHE YRLANVDRSA GKRNNLRLDD WVLCRIYNKK GTLEKYYNVD  180
QKALSSQEEM EEQKPKNLIN FEQNGIVTTE AKKMQQLQQN AMAQQMMNDY LHFETSESAP  240
RLHTDSSGSE QILSPEVLSP EFAYEKEVQS APKWSDLERA LDFQFNMDGF QDDPFVSNQM  300
QYNDQVYPYQ DMFLYMQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-122NAC family protein