PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179315.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 261aa MW: 28804.1 Da PI: 6.0336

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0011	108	130	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C + F ++ L H++ H XP_027179315.1 108 FPCNFCQRKFYSSQALGGHQNAH 130 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEHLKFDLEK EASYENSSDI SSQVASNISV KEHFMDPRKS ILSESSQLTD VTTQLSSEYL 60 LLDLSLNFKS STNELACQES KGFSVSSTSE SSNEPANQTK VAATPRVFPC NFCQRKFYSS 120 QALGGHQNAH KRERTLAKRA MRMGIFSDRY ASLASLPLHG SSFRSLGIKA HSSVHHGFAI 180 AGAGRLPDFG TSARFEQPYM AQPIYMEDDP ELLWPGSFRQ VADPGNSPQS FIVTGSSGLD 240 FAELNPPLEE DHFAPDLTLR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	7e-44	C2H2 family protein