PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179335.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 265aa MW: 29012.6 Da PI: 8.4971

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00028	35	69	10	46
HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHH CS HLH 10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLek 46 + RR+++N+ f+eL +l + + K++ a+i+ XP_027179335.1 35 KLRRNELNEHFQELGNILDTdS---VRLKNDEATIVIS 69 78****************9944...6666777776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MVDCQSDISD SRQEDDLDSN GAVVAKTRHQ AHGKKLRRNE LNEHFQELGN ILDTDSVRLK 60 NDEATIVISP IQALKDLASE VSRLQSEQAA ILQDIKKLAK ENKELREKTS LQFDVGAFEV 120 QRQQRHRSMF PRSAIDPSAV MACAFSYPVA QSVSSGPYPR HTPSLHPKPF LANQSAVPSD 180 PGVMMILRSA AATPHINKPS SRNASTPCIF GKEIARNGSS GQDRSGNGEK SGDIPDMVTD 240 LELAIPGSTA QKPLPRDKGK RPLRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	1e-30	bHLH family protein