PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179635.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 480aa MW: 52845.1 Da PI: 7.4262

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	291	344	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_027179635.1 291 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 344 9****************************************************7 PP
2	Myb_DNA-binding	46.3	9.5e-15	292	343	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_027179635.1 292 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 343 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MPFEQSSKPG PDLSLHISPP CSSSSQICNS IDEINPLSSC FDLDSTRREV QVQKSNTTVQ 60 AYTELSLAHP AANSLTDESH QNHHHRHRSF AGGGTHHLHH EDQPQNPYNQ TAPNISIYQQ 120 PNSQQQMNHI NHGVSLLDVS DGLRPIKGIP VYNHNRSFPF LPLDHHTREV KDPKMGFYSM 180 ANYPSWSSSL SQSSSASVVN QSSSPYFNGG LDHLSILNAA GGPNAAASSA YHRLHQPSGA 240 SSRFNGLGLS SSYQLHHHHN QYGLGASDAS HGMMRSRFLP KLPAKRSMRA PRMRWTSTLH 300 ARFVHAVELL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG 360 SGDEDLSTIG SGAGGDRSSL RRFIDQRGPS DGSILQQESE YPSTTTTLWS NSSSSREGWM 420 QSTTGDLNGV RHSSSMPLEQ RSGHHIEECD SSRPNSYLER KNPSLEFTLG RPDWVEKELA

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MPFEQSSKPG PDLSLHISPP CSSSSQICNS IDEINPLSSC FDLDSTRREV QVQKSNTTVQ  60
AYTELSLAHP AANSLTDESH QNHHHRHRSF AGGGTHHLHH EDQPQNPYNQ TAPNISIYQQ  120
PNSQQQMNHI NHGVSLLDVS DGLRPIKGIP VYNHNRSFPF LPLDHHTREV KDPKMGFYSM  180
ANYPSWSSSL SQSSSASVVN QSSSPYFNGG LDHLSILNAA GGPNAAASSA YHRLHQPSGA  240
SSRFNGLGLS SSYQLHHHHN QYGLGASDAS HGMMRSRFLP KLPAKRSMRA PRMRWTSTLH  300
ARFVHAVELL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG  360
SGDEDLSTIG SGAGGDRSSL RRFIDQRGPS DGSILQQESE YPSTTTTLWS NSSSSREGWM  420
QSTTGDLNGV RHSSSMPLEQ RSGHHIEECD SSRPNSYLER KNPSLEFTLG RPDWVEKELA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-66	G2-like family protein