PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179732.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 219aa    MW: 24581.4 Da    PI: 6.0553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-1785135255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y GVr ++ +g+++AeIrd +    +  r++lg+f+++eeAa a+++a+ +l+g
  XP_027179732.1  85 SYIGVRKRP-WGKYAAEIRDSTR---HgLRVWLGTFDSPEEAAFAYDQAAFSLRG 135
                     599******.**********422...25*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAMMQSFNLF NLEMGSAASE FFPFESSFWW DDNVFLDDSA TSKTEHESGE SKATESIKTG  60
SCKGVSHEEE VTSSLKKKSN KKEKSYIGVR KRPWGKYAAE IRDSTRHGLR VWLGTFDSPE  120
EAAFAYDQAA FSLRGPMASL NFPADRVQES LEGIKHNWEN GCSPAAVLKE THKIRSLSKR  180
RRNQNKDINP KKIVLELEDL GADLLEELLS SSSESTTTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-44ERF family protein