PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179919.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WOX
Protein Properties Length: 277aa    MW: 30885.5 Da    PI: 5.6409
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox672.5e-2195155257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+ F + n  ps+++++e++++l    +++e++V++WFqNrRa+ k+
  XP_027179919.1  95 RQRWTPTPVQLQILERIFDQgNGAPSKQKIKEITNELlqhgQISETNVYNWFQNRRARSKR 155
                     89*****************99**************************************97 PP
2Wus_type_Homeobox97.21.3e-3195157365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+++++G   P+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq
     XP_027179919.1  95 RQRWTPTPVQLQILERIFDQGNGAPSKQKIKEITNELLQHGQISETNVYNWFQNRRARSKRKQ 157
                        89***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEWDKQPPQQ PQATTAAAAA AAAEELNNGG MFVKVMTDEQ MEVLRKQIAV YATICEQLVD  60
LHKSLTSHHD LAGARLGNLY CDPLVTSAGH KITGRQRWTP TPVQLQILER IFDQGNGAPS  120
KQKIKEITNE LLQHGQISET NVYNWFQNRR ARSKRKQQAA ASNNIESEVE TEVESPNDKK  180
TKPEDLQSPH IPTSRNEELC FQNTDVSSGM LSIDPRSSKP EPMFPSDGSS KSAGSFGQMS  240
FYGSMLSNPR MDQLLGKMEV PESYNPYLHA EDYNMTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-79WOX family protein