PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179928.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 217aa    MW: 24446 Da    PI: 10.2462
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.74.8e-063961123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+k F r  nL+ H r H
  XP_027179928.1 39 FVCEICNKGFQRDQNLQLHRRGH 61
                    89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MIAAQVGPVK KKRNLPGMPD PDAEVIALSP KTLLATNRFV CEICNKGFQR DQNLQLHRRG  60
HNLPWKLRQR NGKEVKKRVY VCPEATCIHH DPSRALGDLT GIKKHFCRKH GEKKWKCERC  120
SKKYAVISDW KAHTKTCGTR EYRCDCDTLF SRRDSFITHR AFCDALAQES ARSQTQTLAI  180
TNEEGTLKVQ AQTTTTRTSS SSPPPSPLTP STGVLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.11e-115C2H2 family protein