PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027180024.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 360aa MW: 38748 Da PI: 9.1375

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027180024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.7	3.5e-40	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+al+cprCds+ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkks+ XP_027180024.1 33 QEQALQCPRCDSQNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGSRKNKKSK 93 57899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAPVSMAAKS SAANKDENNH GSGTRKSTSA RPQEQALQCP RCDSQNTKFC YYNNYSLTQP 60 RHFCKTCRRY WTKGGALRNV PIGGGSRKNK KSKPPSRLTV DPKDANMTSD IGGLKFFHGL 120 TPAMDFQLGG ITSFSRVLTN HSSPTSIYNQ LSSSFGDISI SGTTSGAITS SPCFNLDPSA 180 SSGGSLMGFN FPFSSVPKPA GDHGTALGFS TTTGDVHSSL AYSIESLSSI NQDLHYKLQQ 240 QRLAMLYGTT GEDQKVMMST SVNPSVPFEK PQPILFHNLE NSTTPKTNAS GVDINSRKEG 300 INGASLSTEW FFDNTTYAPV TPTPTNSGGN GGSDQNHLVN HNWNGMINPV WNNLSQYSAL

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAPVSMAAKS SAANKDENNH GSGTRKSTSA RPQEQALQCP RCDSQNTKFC YYNNYSLTQP  60
RHFCKTCRRY WTKGGALRNV PIGGGSRKNK KSKPPSRLTV DPKDANMTSD IGGLKFFHGL  120
TPAMDFQLGG ITSFSRVLTN HSSPTSIYNQ LSSSFGDISI SGTTSGAITS SPCFNLDPSA  180
SSGGSLMGFN FPFSSVPKPA GDHGTALGFS TTTGDVHSSL AYSIESLSSI NQDLHYKLQQ  240
QRLAMLYGTT GEDQKVMMST SVNPSVPFEK PQPILFHNLE NSTTPKTNAS GVDINSRKEG  300
INGASLSTEW FFDNTTYAPV TPTPTNSGGN GGSDQNHLVN HNWNGMINPV WNNLSQYSAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-39	Dof family protein